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Regulation briefEuropean Union

EU Clinical Trials Regulation Has Governed All EU Trials Since 31 January 2025

The three-year transition period of the EU Clinical Trials Regulation ended in January 2025, and from 31 January 2025 every clinical trial of a medicinal product in the EU, including trials first authorised under the old Directive, has been subject to the Regulation and managed through the Clinical Trials Information System. Sponsors of trials that were not transitioned must submit a new application in CTIS. Targeted amendments to the Regulation proposed in December 2025 were still in the legislative process in November 2026.

Pubrica InsightsWritten by the regulatory and market access teams Published9 November 2026 Last checked9 November 2026 Reading time4 minutes Sources7
  • Fully applicable 31 January 2025
  • CTIS is the single entry point
  • Over 5,000 trials transitioned
  • Non-transitioned trials face corrective measures
  • Amendments proposed under the Biotech Act

In force European Union

Instrument
Regulation (EU) No 536/2014 on clinical trials on medicinal products for human use (Clinical Trials Regulation), with the Clinical Trials Information System (CTIS)
Issued by
European Parliament and Council of the EU; CTIS operated by the European Medicines Agency (EMA)
Date
Transition period ended 30 January 2025; all EU trials subject to the Regulation from 31 January 2025
Applies to
Sponsors of all clinical trials of medicinal products with sites in the EU/EEA, including ongoing trials authorised under the former Clinical Trials Directive
What you must do
Conduct all trials under the Regulation through CTIS; sponsors of ongoing Directive trials that were not transitioned must submit a new application via CTIS
Primary source
Clinical Trials Regulation becomes fully applicable
European Medicines Agency, 31 January 2025 · read 9 November 2026

Read the Official Document

What Changed at the End of the Transition Period

The Clinical Trials Regulation, Regulation (EU) No 536/2014, replaced the earlier Clinical Trials Directive with a single set of rules for authorising and supervising clinical trials of medicinal products across the EU. Its application was followed by a three-year transition period, during which trials authorised under the Directive could continue under the old rules. That period ended in January 2025.

In its announcement dated 31 January 2025, the European Medicines Agency stated that from that date all clinical trials in the EU, including ongoing trials authorised under the previous framework, are subject to the Clinical Trials Regulation. The Clinical Trials Information System (CTIS) now supports the submission, assessment and oversight of all trials in the EU, and it includes a public searchable database intended for healthcare professionals, patients and the general public. A published copy of the EMA release reports that more than 5,000 trials were transitioned to the Regulation through CTIS during the transition period.

Transition was required only for Directive trials that had an expected completion date after 30 January 2025 and at least one active site in the EU or EEA after that date. EMA had advised sponsors to allow for Member State authorisation of a transition, which could take up to three months.

Consequences for Trials That Were Not Transitioned

According to EMA, trials that remained ongoing after 30 January 2025 without having been moved to the new system may be subject to corrective measures applied by EU Member States. The simplified transition procedure is no longer available. Sponsors of ongoing Directive trials must instead submit a new application through CTIS, which is assessed under the full procedures of the Regulation.

For sponsors, this means that every new trial, every substantial modification and all required safety and results reporting for EU trials now run through CTIS under a single legal framework. Because CTIS includes a public searchable database, sponsors should expect information submitted for their trials to be visible to healthcare professionals, patients and the public.

Sponsors that still hold legacy Directive authorisations in their portfolio, for example for long-term follow-up studies, should confirm whether those trials met the transition criteria and, if they did and were not transitioned, take advice from the relevant national competent authorities on the steps required.

Proposed Amendments Under the European Biotech Act

In December 2025 the European Commission proposed the European Biotech Act, which includes targeted amendments to Regulation (EU) No 536/2014. A Council working document published in 2026 shows the Regulation as it would be amended. Law firm and industry summaries report that the proposal would apply to all clinical trials of medicinal products, whether biological or chemical, and would shorten the approval timeline for multinational trials from about 106 days to about 75 days. They also report a reduction in the assessment timeline for substantial modifications from 96 days to 47 days, removal of the additional 50-day assessment step for advanced therapy trials, a minimal-intervention trial category requiring only ethics approval, and a harmonised legal basis under the GDPR for processing trial data.

These changes are not yet law. The file is being handled under the ordinary legislative procedure (2025/0406(COD)). Secondary sources checked for this brief gave differing timetables: one reported that lead committees in the European Parliament were expected to vote in December 2026, with a plenary vote around the end of 2026 or in early 2027, and another reported an EMA expectation that the first changes to the Clinical Trials Regulation could apply no earlier than early 2028. The current stage should be confirmed in the Legislative Observatory and Council records before planning around any proposed timeline.

What Sponsors and Authors Need to Do

Sponsors should treat CTIS as the sole route for EU trial applications and maintain internal processes for the Regulation’s timelines, Protocol and lay summary authors should prepare documents with publication in mind, because CTIS makes much trial information public.

Teams planning trials for 2027 and beyond should monitor the Biotech Act negotiations, since shorter assessment timelines and a new minimal-intervention category could affect submission planning and site activation estimates once adopted and applicable. Until then, the Regulation as it currently stands, together with the guidance and question-and-answer documents published for CTIS users, remains the basis for planning EU trial submissions.

What to Do

Four checks for sponsors running trials in the EU

Audit legacy trialsIdentify any Directive-authorised trial that remained active in the EU after 30 January 2025 without transition.
File new applications where neededSubmit a new CTIS application for non-transitioned trials that are still running.
Prepare for publicationDraft protocols, lay summaries and results with CTIS transparency rules in mind.
Track the Biotech ActFollow procedure 2025/0406(COD) for changes to assessment timelines and trial categories.

National competent authorities and ethics committees remain responsible for corrective measures and for authorisation decisions within the CTIS procedure.

Who It Applies To

Subjects

Clinical trials of medicinal products

All interventional trials of medicinal products for human use with EU or EEA sites.

Population

Sponsors, investigators and authorities

Commercial and academic sponsors, Member State authorities and ethics committees using CTIS.

Countries

EU and EEA

All trials with sites in EU Member States, with transition criteria referring to EU and EEA sites.

Frequently Asked Questions

EMA announced that from 31 January 2025 all clinical trials in the EU, including ongoing trials authorised under the Directive, are subject to the Regulation. The transition period ended on 30 January 2025.

Such trials may be subject to corrective measures by Member States. Transition procedures are no longer available, so sponsors must submit a new application via CTIS.

Transition was required for Directive trials with an expected completion date after 30 January 2025 and at least one active EU or EEA site after that date.

The Commission proposed targeted amendments as part of the European Biotech Act in December 2025. At the time of checking, the proposal was still under negotiation and no amendment had been adopted.

Sources

Each source was checked on the date shown. Requirements may change after that date; confirm the current version with the issuing body.

  1. 1European Medicines Agency. (2025, January 31). Clinical Trials Regulation becomes fully applicable. News release.
    https://www.ema.europa.eu/es/news/clinical-trials-regulation-becomes-fully-applicable Read 9 November 2026.
  2. 2European Medicines Agency. (2024). Clinical trials: transition to new EU system, one year left. News release.
    https://www.ema.europa.eu/en/news/clinical-trials-transition-new-eu-system-one-year-left Read 9 November 2026.
  3. 3iEU Monitoring. (2025, January 31). EMA: EU Clinical Trials Regulation becomes fully applicable. Reproduction of EMA release.
    https://ieu-monitoring.com/editorial/ema-eu-clinical-trials-regulation-becomes-fully-applicable/539108/ Read 9 November 2026.
  4. 4Council of the European Union. (2026). Working document WK 480/2026 showing changes to Regulation (EU) 536/2014 under the Biotech Act proposal. Council working document.
    https://data.consilium.europa.eu/doc/document/WK-480-2026-INIT/en/pdf Read 9 November 2026.
  5. 5Baker McKenzie. (2025, December 19). EU Biotech Act unveiled: Commission’s proposal to turn Europe into a biotech powerhouse. Law firm commentary.
    https://healthcarelifesciences.bakermckenzie.com/2025/12/19/eu-biotech-act-unveiled-commissions-proposal-to-turn-europe-into-a-biotech-powerhouse/ Read 9 November 2026.
  6. 6Jones Day. (2026, May). The proposed European Biotech Act, 100 days on. Law firm commentary.
    https://www.jonesday.com/en/insights/2026/05/the-proposed-european-biotech-act-100-days-on Read 9 November 2026.
  7. 7Sidley Austin. (2026, September 21). EU Biotech Act I: Parliament and Council back Europe’s biotech competitiveness agenda. Law firm commentary.
    https://goodlifesci.sidley.com/2026/09/21/eu-biotech-act-i-parliament-and-council-back-europes-biotech-competitiveness-agenda-spc-incentive-now-the-key-battleground/ Read 9 November 2026.

EU Clinical Trials RegulationCTISRegulation 536/2014clinical trial transitionEuropean Biotech Act

EU Clinical Trials Regulation Has Governed All EU Trials Since 31 January 2025Regulatory intelligence

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